| Abukuma | DE-229 | 1988 | Abukuma class |
| Aishima | MSC-688 | 2002 | Sugashima class |
| Ajisai | LSSL-425 | 1945? | ex-US LSSL type |
| Akane | LSSL-411 | 1945? | ex-US LSSL type |
| Akashi | AGS-5101 | 1969 | Akashi |
| Akebono | DE-201 | 1955 | Akebono |
| Akebono | DD-108 | 2000 | Murasame class (II) |
| Akigumo | DD-120 | 1973 | Yamagumo class |
| Akishio | SS-579 | 1985 | Yushio class |
| Akizuki | DD-161 | 1959 | Akizuki class |
| Akizuki | DD-115 | 2010 | Akizuki class |
| Amagiri | DD-154 | 1987 | Asagiri class |
| Amakusa | AMS-4303 | 2003 | Hiuchi class |
| Amami | MSC-625 | 1966 | Kasado class |
| Amatsukaze | DD-163 | 1963 | Amatsukaze |
| Aoi | LSSL-408 | 1945? | ex-US LSSL type |
| Aokumo | DD-119 | 1972 | Yamagumo class |
| Aoshima | MSC-689 | 2003 | Sugashima class |
| Arashio | SS-565 | 1968 | Asashio class |
| Arashio | SS-586 | 1992 | Harushio class |
| Ariake | DD-183 | 1943 | ex-USS Fletcher class |
| Ariake | DD-109 | 2000 | Murasame class (II) |
| Asagao | 1945? | ex-US LSSL type | |
| Asagiri | DD-151 | 1986 | Asagiri class |
| Asagumo | DD-115 | 1966 | Yamagumo class |
| Asahi | DE-262 | 1943 | ex-USS Cannon class |
| Asakaze | DD-181 | 1941 | ex-USS Greeves class |
| Asakaze | DD-169 | 1977 | Tachikaze class |
| Asashio | SS-562 | 1965 | Asashio class |
| Asashio | SS-589 | 1995 | Harushio class |
| Asashio | TSS-3601 | 1995 | Harushio class |
| Asayuki | DD-132 | 1985 | Hatsuyuki class |
| Ashigara | DD-178 | 2006 | Atago class |
| Asuka | ASE-6102 | 1994 | Asuka |
| Atada | MSC-601 | 1956 | Atada class |
| Atago | DD-177 | 2005 | Atago class |
| Atago Maru | MS-54 | Auxiliary sweepers | |
| Atsumi | LST-4101 | 1972 | Atsumi class |
| Awaji | MSC-634 | 1970 | Takami class |
| Awashima | MS-23/MSI-683 | 1945 | ex-IJN Pa-1 class |
| Awashima | MSC-670 | 1989 | Hatsushima class |
| Ayame | LSSL-410 | 1945? | ex-US LSSL type |
| Ayanami | DD-103 | 1957 | Ayanami class |
| Ayase | DE-216 | 1970 | Chikugo class |
| Azami | LSSL-419 | 1945? | ex-US LSSL type |
| Azuma | ATS-4201 | 1969 | Azuma |
| Bara | LSSL-406 | 1945? | ex-US LSSL type |
| Botan | LSSL-442 | 1945? | ex-US LSSL type |
| Buna | PF-294 | 1943 | ex-USS Tacoma class |
| Bungo | MST-464 | 1997 | Uraga class |
| Chiburi | MSC-620 | 1963 | Kasado class |
| Chichijima | MSC-658 | 1983 | Hatsushima class |
| Chichijima | MSC-605 | 2011 | Enoshima class |
| Chihaya | ASR-401 | 1960 | Chihaya |
| Chihaya | ASR-403 | 1998 | Chihaya (II) |
| Chikugo | DE-215 | 1970 | Chikugo class |
| Chikuma | DE-233 | 1992 | Abukuma class |
| Chitose | DE-220 | 1973 | Chikugo class |
| Chiyoda | AS-405 | 1983 | Chiyoda |
| Chiyozuru | MS-01/MSI-695 | 1944 | ex-IJN CHa-1 class |
| Chokai | DD-176 | 1996 | Kongo class |
| Dai-1 Chuko Maru |
MS-75 | Auxiliary sweepers | |
| Dai-2 Senyu Maru |
MS-35 | Auxiliary sweepers | |
| Dai-2 Tokuyama Maru |
MS-38 | Auxiliary sweepers | |
| Dai-3 Tokuyama Maru |
MS-39 | Auxiliary sweepers | |
| Dai-12 Tokuyama Maru |
MS-50 | Auxiliary sweepers | |
| Dai-20 Shinko Maru |
MS-88 | Auxiliary sweepers |
| Enoshima | MSC-652 | 1980 | Hatsushima class |
| Enoshima | MSC-604 | 2010 | Enoshima class |
| Enshu | AMS-4305 | 2007 | Hiuchi class |
| Erimo | AMC-491 | 1955 | Erimo |
| Etajima | MSC-656 | 1943 | ex-USS Albatros class |
| Etajima | MSC-663 | 1985 | Hatsushima class |
| Ezogigu | LSSL-426 | 1945? | ex-US LSSL type |